Home » Школа-конференция. Май 2015

Школа-конференция. Май 2015

THEODOSIUS DOBRZHANSKY CENTER FOR GENOME BIOINFORMATICS,

ST. PETERSBURG STATE UNIVERSITY & ACADEMIC UNIVERSITY RETREAT

29-30 May 2015, PETROVSKY HALL THE TWELVE COLLEGIA BUILDING

RETREAT OF DOBZHANSKY CENTER
12 Colleges
May 29-30, 2015

FRIDAY 29 MAY
Section chair: Ekaterina Chernyaeva
09:15-09:30 Stephen O’Brien WELCOME

09:30-09:50 Ksenia Krasheninnikova Dobzhansky Center Comparative analysis of the Sable antelope genome
09:50-10:10 Anton Bankevich CAB Application of TruSeq technology for metagenomics and structural variation detection
10:10-10:30 Aleksey Komissarov Dobzhansky Center Genome annotation from jellyfish to jaguar genomes
10:30-10:50 Mike Rayko Dobzhansky Center Pangolin genome project
10:50-11:20 COFFEE BREAK
Section chair: OlgaBajenova
11:20-11:40 Igor Evsyukov Dobzhansky Center Searching for genes involved in CEA-producing colorectal cancer cell metastasis using RNA-sequencing method
11:40-12:00 Anna Gorbunova Dobzhansky Center GWATCH platform: Southern China nasopharyngeal carcinoma genome-wide association study
12:00-12:20 Sergey Malov Dobzhansky Center On an extended actuarial estimator for categorical survival data and its applications
12:20-12:40 Alexey Antonik Dobzhansky Center A toolset for density and regions with small p-value computation: description and programming chalenges
12:40-14:00 LUNCH
Section chair: SergeyMalov
14:00-14:20 Ekaterina Chernyaeva Dobzhansky Center Study of M. tuberculosis genomes spread in Russia
14:20-14:40 Andrey Prjibelski CAB rnaSPAdes: yet another genome assembler modified for RNA-Seq
14:40-15:00 Anton Logachev Dobzhansky Center Search and verification of Repetitive Elements in large and small eukaryotic genomes
15:00-15:20 Nataliia Katolikova Raul Gainetdinov’s team Direct reprogramming of GABAergic neurons into dopaminergic neurons for treatment of Parkinson disease
15:20-15:50 COFFEE BREAK
Section chair: Anna Gorbunova
15:50-16:10 Olga Bajenova Dobzhansky Center Signaling involved in colorectal cancer liver metastasis induced by CEA
16:10-16:30 Kirill Grigorev Dobzhansky Center TBA
16:30-16:50 Aleksey Komissarov Dobzhansky Center Moving forward to Steve annotation (part 2)
SATURDAY 30 MAY
Section chair: Vladimir Brukhin
9:30-9:50 Anton Svitin Dobzhansky Center GWATCH: untangling disease-gene associations
9:50-10:10 Andrey Shevchenko Dobzhansky Center Replication in Genome-Wide Association Studies in the two Botswana cohorts
10:10-10:30 Gaik Tamazian Dobzhansky Center Botswana population whole-genome study
10:30-10:50 Stephen O’Brien Dobzhansky Center My Three research agendas for 2015!!!
10:50-11:20 COFFEE BREAK
Section chair: Anton Svitin
11:20-11:40 Vladimir Brukhin Dobzhansky Center Genome Russia: Goals, Strategy and Challenges
11:40-12:00 Nikolay Cherkasov Dobzhansky Center IT environment of Genome Russia Project
12:00-12:20 Mikhail Rotkevich Dobzhansky Center Database for Genome Russia Project: Thoughts and Plans
12:20-12:40 Serguei Simonov Dobzhansky Center Security and Confidentiality of Genomic Information
12:40-14:00 LUNCH
Section chair: Ksenia Krasheninnikova
14:00-15:00 Jose Lopez NOVA Uinversity KEYNOTE LECTURE: Lessons from the Deepwater Horizon Oil Spill in the Gulf of Mexico
15:00-15:20 Andrey Yurchenko Dobzhansky Center HGT signatures in Mycobacterium Tuberculosis
15:20-15:40 Pavel Dobrynin Dobzhansky Center Genomic Legacy of the African Cheetah, Acinonyx jubatus
15:40-16:10 COFFEE BREAK
Section chair: Andrey Yurchenko
16:10-16:30 Sergey Nurk CAB SPArcle tool for detection of large variants in bacterial genomes
16:30-16:50 Sofiia Kolchanova Dobzhansky Center Caribbean Parrots genomes project
16:50-17:10 Vladimir Krasikov Dobzhansky Center Association of levels of biochemical markers with observed genotypes in cohort of healthy individuals of Chinese origin
17:10-17:30 Stephen O’Brien Dobzhansky Center TBA / Closing notes
19:00 Gala at Karl and Friedrick’s


 

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