Research Project Portals

Traditional Miniconference (retreat) of the lab was help on April 7-9 in Natali hotel (Pushkin city). The agenda of the conference includes:

April 8th, Friday

 

10.20Stephen O'Brien. Introduction.
10.30Pasha Dobrynin.
10.50Andrey Shevchenko.
11.10Sergey Malov. On Interval Censoring of Right Censored Survival Data Model
11.30Sergey Simonov
11.45Coffee-break
12.00Katya Chernyaeva. Genetic Diversity of Russian Mycobacterium tuberculosis Isolates Based on Whole Genome Sequencing Data
12.20Mickle Rotkevich. GWAS in bacteria.
12.40Sophie Kolchanova.
13.00 Lunch
14.15Alexey Novogilov. Choosing regional groups of Russians for Russian Genomes study
14.35Vladimir Brukhin. Genome Russia project: aims and approaches.
14.55Anna Gorbunova. DNA sample collection in Genome Russia project. Medical genetics interpretation of sequence variants from Botswana WGS cohort in NextCODE platform.
15.15Andrey Yurchenko.
15.35Nikolay Cherkassov. Usage of Russian Genome protected network
15.55Svetlana Limborska. Population genetics background determines chemotherapy response
16.15Coffee-break
16.30Alexey Komissarov. De novo genome assembly and variation calling with Fermi toolset.
16.45Alexey Ryskov. Molecular genetic studies of parthenogenetic lizard species of the genus Darevskia
17.05Alexandra Zakharova. Meiosis-related genes annotation and comparative study of a parthenogenetic lizard of genus Darevskia
17.25Alexey Antonik. On the geostatistics applications.
17.45Anton Logachev.
19.00Dinner

April 9th, Saturday

 

09.00Gaik Tamazian. Predicting variant effects in protein-coding genes
09.20Slava Sidorov. Variant calling pipeline for Genome Russia and Botswana projects
09.40Sergey Kliver. Annotation of protein-coding genes in genomes without transcriptome data.
10.00Igor Evsiukov.
10.20Dasha Zhernakova. Hepatitis B GWAS dataset and Comparison of genotyping quality in Botswana samples 
10.40Coffee-break
11.00Denis Larkin.
11.20Ksenia Krasheninnikova. Classification of rearrangements based on Progressive Cactus alignments and Ragout-based synteny blocks reconstruction
11.40Stephen O'Brien. Russian Genomes.

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Theodosius Dobzhansky

Geneticist & Evolutionary Biologist
 
Theodosius Dobzhansky American geneticist and evolutionary biologist and a central figure in the field of evolutionary biology is recognized for...

Stephen J O'Brien

Chief Scientific Officer
 
I welcome you to the Site of the brand new Center of Genome Informatics at St Petersburg State University. The...

Vladimir Brukhin

Leading researcher, Deputy Director 
 
Vladimir Brukhin    Leading researcher, Deputy Director  Joined the Theodosius Dobzhansky Center for Genome Bioinformatics in February 2013 right after returning...

Lab's news

SPBU on web site published an article about achievement of the Center and published article.

Wednesday 10.07.2019 at 3pm. Alexander Tiskin (Department of Computer Science, University of Warwick, United Kingdom) "The surprising algebra of sequence alignment".